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KPI Info

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CoreGuard SNP Comparison Viewer

Drop a report to begin (.json, .json.gz, .bin, .bin.gz)

SNP Pipeline Comparison Viewer

1. Generate a report

Create a YAML config with your VCF/BAM files, then run:

coreguard compare --config project.yaml -o report.bin.gz --binary --gzip
2. Upload and visualize

Drop your report file here or click to browse:

.json .json.gz .bin .bin.gz

Or try a demo dataset:

4 L.m. (EGD-e)

4 L.m. (F2365)

53 L. mono

17 B. melitensis

10 WNV

GitHub
Description
Configuration
Pipelines

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Statistics
SNP Distance Matrices
CoreGuard SNP Comparison Viewer GitHub